I have a cloned project. Most of the project is shared to other projects (i.e. workflow, issue types).
Is there a way that I can unlink certain areas or change it without effecting the other projects?
EDIT: Addition to question
You can't really "unlink" them, the issue types are single shared objects, not links.
What you can do:
JIRA will ask you to map the old issue types on to new ones and then change them all for you
I have multiple projects that use variations of the same base workflow. The variations depend on the requirements of the project or issue type. The variations mostly come in the form of new statuses ...
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