The issue matrix plugin has these modes listed in the documentation: Subtask, IssueLinks, Epic, Filter, JQL
What's the difference between "Issue Links" and "Epic" when the issue link of "Epic-Story Link" can be used on the former?
Epic mode has been designed to be as close as possible to the standard "Issues In Epic" panel in JIRA - the main difference between Epic mode and Issue Links mode is what the "plus" button does - in Epic mode it opens the create issue dialog so you can create a story linked to the current epic, while in Issue Links mode it will open the create link dialog. Also, in Epic mode you can select the issue types you want to see.
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