How do I break the link between these files, so that I can have a different query in both?
I believe that I have detected the same problem.
It seems the JQL query is stored in some external resource outside the Excel spreadsheet file (my technical intuition).
I have one spreadsheet with a JQL query. I copy that in File Explorer to a new named copy. Open that new file. Change the JQL query to get different data. Close that new file. Open the original untouched file. Look at the JQL query. Surprise! It is now the same as the query in the new modified file! Change it there in the old file back to the old value. Save and close the old file. Open the new file. Surprise! The JQL query in the new file is set back to the old JQL query!
Initially I saw this kind of behavior inside one spreadsheet, between two tabs attempting to have their own JQL queries and I thought "ok, only one JQL query per spreadsheet file", but this sharing the one JQL query across all spreadsheets on my OS? That's really very limiting.
I also think that I saw this "shared" behavior with the "Fields" settings, but I haven't performed a controlled test as I did with JQL Query.
And I think that this gives a clue to this behavior, apparently this is a known behavior - if you copy spreadsheets there is a link between the two excel spreadsheets under the covers in the Jira Cloud data link. They are saying here to only use "Create New" if you want to use Jira Cloud for Excel, otherwise the data link definition is shared between the cloned spreadsheets (menu "Save As" or explorer File Copy").
So apparently the Jira Cloud for Excel query definition (and probably the fields definition) is not stored inside the Excel sheet, but in some external OS/Cloud resource, and it gets carried over and shared when you copy a spreadsheet.
Possibly tabs inside a spreadsheet are equally affected, as I recall similar odd behavior, but I haven't tested that.
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(I had another reply here, but it seems to have disappeared.)
This reply indicates that there is a known behavior of this order.
https://community.atlassian.com/t5/Jira-articles/The-add-in-you-ve-been-waiting-for-Jira-Cloud-for-Excel/bc-p/1595549#M3844
You have to use "Create New" to start a new JQL query definition, if you use "Save as" or copy the file, the JQL query is shared between Spreadsheets.
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Ugh. This is a disaster. Creating a new sheet, adding a new Jira Cloud tab, then copying the non-Jira-Cloud analysis sheets from the old spreadsheet leaves the formulae in the new sheet pointing to the old spreadsheet and MS is bitterly resisting any attempts to repoint those formulae at the local tabs in the new sheet. :(
It would be sooo much better if you could just copy the spreadsheet file (or Save As a new name) and then repoint the JQL query (and Fields) at the new desired data set and have that stay with the new spreadsheet and leave the JQL query alone in the old spreadsheet. This is really quite suffocating being unable to "copy" a spreadsheet and have the Jira Cloud link copy and become independent of the old spreadsheet.
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Thank you for your answer. The "Break Link" functionality is not the solution yet, I'm afraid. I broke all links as you indicated, but still have the same behavior.
Copypasting all data, macros and charts would be a lot of work. I'm thinking this is a bug in the plugin.
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