Is it possible to create sub-tasks in a different project than the parent issue? We don't want numerous sub-tasks to throw off the parent issue sequences.
It is not possible. You might be able to do it with heavy JIRA customization but I wouldn't recommend due to the effort involved and possible issues.
Any way to affect the issue numbering? Something like: ISSUE-SUB-5
You would need dev work for this too. Again, this also can affect other funtionalities like rendering the issue keys as links in comments etc.
I completely agree with Jobin - there's no way to do subtasks in different projects.
Apart from the mass of coding and testing you'd need, it would be an organisational disaster too. I've seen it done (not in Jira) a few times, and it's an utter nightmare. If you really think you need to do this, then it's almost certain that your processes are a mess. Apologies if that seems harsh, it may well be working for you and I've only had bad experiences. But the projects I've seen it done in were chaotic and all failed miserably.
For the key changes, again, Jobin is correct - you'll need code, it'll be difficult, and it will break other bits of Jira unless you do a lot of coding and catch all the places that expect a more simple key (I imagine Greenhopper especially would be an utter pain to update)
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