I could not find any documentation on migrating Jira from Linux to Windows. Can someone point me to any available documentation?
Welcome to the Atlassian Community.
You can find the documentation for how to migrate to a new server here, Migrating Jira applications to another server
Basically what you will be doing is installing Jira on your Windows server, do a xml backup on the Linux one, restore it on Windows and then move attachments and re-apply any modifications you have done.
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