Since the move from JIRA userid to atlassioan account for authentication I get a 401 error calling REST JIRA APIs with basic authentication.
Can this be related to the @ in my user (atlassian account) ?
What operation are you runing? If it's something in admin interface, you will need to manage cookies.
I'm having the same issue here. Every few days the API returns a 401 header. After resetting the password from Atlassian (to the same as before), it works again.
Until it's reset again and I ahve to run through the same steps again to fix it.
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My scripts are developed in php but for problem determination purpose I'm using "curl" from Mac OSx as documented here : https://developer.atlassian.com/cloud/jira/platform/jira-rest-api-basic-authentication/?_ga=1.119452107.353217699.1488354328
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