When I log in I use my AD username/password combination which indicates I managed to get the AD logins working, we just want the credentials passed through seamlessly, i.e. we don't have to log in.
It it possible to automatically log-in Atlassian products using Single Sign-On using a third-party (PAID) app or a native one if you use DataCenter (FREE).
See SSO apps on Atlassian Marketplace
You can achieve seamless AD login through Marketplace apps with Kerberos support. These will allow users on trusted networks to be logged in automatically without being exposed to any login-dialog at all.
Full disclosure: I work for Kantega SSO, the vendor of the most popular Kerberos app for both Server and Data Center. I am happy to assist you if you want a demo or need help configuring an optimal SSO solution in your environment.
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