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Bamboo bootstrap failed

Deep Shadows Games
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February 23, 2021

After power went off,  bamboo won't start:
Bamboo bootstrap failed: Your Bamboo instance could not start because health check failed.
Tried to delete cache, plugins, etc.
Logs at start:

sudo ./bin/start-bamboo.sh -fg

Password:

 

Server startup logs are located in /Users/sergeyz/Documents/BAMBOO/logs/catalina.out

 

Bamboo Server Edition

   Version : 7.2.2

                  

 

If you encounter issues starting or stopping Bamboo Server, please see the Troubleshooting guide at https://confluence.atlassian.com/display/BAMBOO/Installing+and+upgrading+Bamboo

 

Using CATALINA_BASE:   /Users/sergeyz/Documents/BAMBOO

Using CATALINA_HOME:   /Users/sergeyz/Documents/BAMBOO

Using CATALINA_TMPDIR: /Users/sergeyz/Documents/BAMBOO/temp

Using JRE_HOME:        /Library/Java/JavaVirtualMachines/jdk1.8.0_281.jdk/Contents/Home

Using CLASSPATH:       /Users/sergeyz/Documents/BAMBOO/bin/bootstrap.jar:/Users/sergeyz/Documents/BAMBOO/bin/tomcat-juli.jar

24-Feb-2021 09:53:01.543 WARNING [main] org.apache.tomcat.util.digester.SetPropertiesRule.begin [SetPropertiesRule]{Server/Service/Engine/Valve} Setting property 'resolveHosts' to 'false' did not find a matching property.

24-Feb-2021 09:53:01.562 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent The Apache Tomcat Native library which allows using OpenSSL was not found on the java.library.path: [/Users/sergeyz/Library/Java/Extensions:/Library/Java/Extensions:/Network/Library/Java/Extensions:/System/Library/Java/Extensions:/usr/lib/java:.]

24-Feb-2021 09:53:01.659 INFO [main] org.apache.coyote.http11.AbstractHttp11Protocol.configureUpgradeProtocol The ["http-nio-8085"] connector has been configured to support HTTP upgrade to [h2c]

24-Feb-2021 09:53:01.659 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8085"]

24-Feb-2021 09:53:01.704 INFO [main] org.apache.tomcat.util.net.NioSelectorPool.getSharedSelector Using a shared selector for servlet write/read

24-Feb-2021 09:53:01.734 INFO [main] org.apache.catalina.startup.Catalina.load Initialization processed in 1049 ms

24-Feb-2021 09:53:01.758 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service [Catalina]

24-Feb-2021 09:53:01.758 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet Engine: Apache Tomcat/8.5.57

24-Feb-2021 09:53:20.070 INFO [localhost-startStop-1] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.

24-Feb-2021 09:53:29.743 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8085"]

24-Feb-2021 09:53:29.758 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in 28022 ms

LOGS FROM BAMBOO HOME:
2021-02-24 09:53:20,639 INFO [localhost-startStop-1] [BootstrapLoaderListener] Starting BootstrapLoaderListener2021-02-24 09:53:20,640 INFO [localhost-startStop-1] [lifecycle] *******************************2021-02-24 09:53:20,640 INFO [localhost-startStop-1] [lifecycle] *   Bamboo is starting up     *2021-02-24 09:53:20,640 INFO [localhost-startStop-1] [lifecycle] *******************************2021-02-24 09:53:20,643 INFO [localhost-startStop-1] [ServletContextHolder] Setting servlet context: Bamboo2021-02-24 09:53:20,811 INFO [localhost-startStop-1] [lifecycle] atlassian.org.osgi.framework.bootdelegation set to javax.servlet,javax.servlet.*,sun.*,com.sun.*,org.w3c.dom.*,org.apache.xerces.*,org.jboss.byteman.*,jdk.internal.reflect2021-02-24 09:53:21,020 INFO [localhost-startStop-1] [BootstrapLoaderListener] App classloader is the same as web app classloader2021-02-24 09:53:22,844 INFO [localhost-startStop-1] [lifecycle] Starting Bamboo 7.2.2 (build #70209 Fri Jan 22 16:06:01 EET 2021) using Java 1.8.0_281 from Oracle Corporation2021-02-24 09:53:22,844 INFO [localhost-startStop-1] [lifecycle] Real path of servlet context: /Users/sergeyz/Documents/BAMBOO/atlassian-bamboo/2021-02-24 09:53:23,179 INFO [localhost-startStop-1] [H2DatabaseUpgraderImpl] Current database is H2, checking if it requires update...2021-02-24 09:53:23,180 INFO [localhost-startStop-1] [DefaultBootstrapManager] Running validation tasks2021-02-24 09:53:23,256 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ----------------------------------------------------------------------2021-02-24 09:53:23,256 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 1 : Assert that Bamboo isn't running on HSQL database (post-bootstrap)2021-02-24 09:53:23,256 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ----------------------------------------------------------------------2021-02-24 09:53:23,260 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 1 completed successfully.2021-02-24 09:53:23,284 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -------------------------------------------------------------------2021-02-24 09:53:23,284 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 2 : Validate that JDBC driver is available in classpath (bootstrap)2021-02-24 09:53:23,284 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -------------------------------------------------------------------2021-02-24 09:53:23,287 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 2 completed successfully.2021-02-24 09:53:23,299 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------2021-02-24 09:53:23,299 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 3 : Validate if build number in home directory matches database (bootstrap)2021-02-24 09:53:23,299 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------2021-02-24 09:53:24,013 INFO [localhost-startStop-1] [HikariDataSource] HikariPool-1 - Started.2021-02-24 09:53:24,487 ERROR [localhost-startStop-1] [BootstrapUpgradeHelper] Error getting database connectionorg.hibernate.HibernateException: com.zaxxer.hikari.pool.HikariPool$PoolInitializationException: Failed to initialize pool: IO Exception: null [90028-199] at org.hibernate.hikaricp.internal.HikariCPConnectionProvider.configure(HikariCPConnectionProvider.java:63) at org.hibernate.boot.registry.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:107) at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:246) at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:214) at com.atlassian.bamboo.upgrade.BootstrapTaskConnectionProvider.getConnectionProvider(BootstrapTaskConnectionProvider.java:30) at com.atlassian.bamboo.upgrade.BootstrapTaskConnectionProvider.getConnectionProvider(BootstrapTaskConnectionProvider.java:25) at com.atlassian.bamboo.upgrade.BootstrapTaskConnectionProvider.getConnection(BootstrapTaskConnectionProvider.java:68) at com.atlassian.bamboo.upgrade.utils.impl.BootstrapUpgradeHelper.getDatabaseConnection(BootstrapUpgradeHelper.java:45) at com.atlassian.bamboo.upgrade.tasks.validation.BuildNumberInHomeMatchesDatabase.getBuildNumberFromDatabase(BuildNumberInHomeMatchesDatabase.java:76) at com.atlassian.bamboo.upgrade.tasks.validation.BuildNumberInHomeMatchesDatabase.doUpgrade(BuildNumberInHomeMatchesDatabase.java:50) at com.atlassian.bamboo.upgrade.BootstrapUpgradeManagerImpl.runValidationTask(BootstrapUpgradeManagerImpl.java:134) at com.atlassian.bamboo.upgrade.BootstrapUpgradeManagerImpl.lambda$runValidationTasks$0(BootstrapUpgradeManagerImpl.java:93) at com.atlassian.bamboo.upgrade.AbstractUpgradeManager.forEachTask(AbstractUpgradeManager.java:147) at com.atlassian.bamboo.upgrade.BootstrapUpgradeManagerImpl.runValidationTasks(BootstrapUpgradeManagerImpl.java:93) at com.atlassian.bamboo.setup.DefaultBootstrapManager.runValidationTasks(DefaultBootstrapManager.java:392) at com.atlassian.bamboo.setup.DefaultBootstrapManager.performPersistenceUpgrade(DefaultBootstrapManager.java:296) at com.atlassian.config.bootstrap.DefaultAtlassianBootstrapManager.init(DefaultAtlassianBootstrapManager.java:81) at com.atlassian.bamboo.setup.BootstrapLoaderListener.contextInitialized(BootstrapLoaderListener.java:143) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4689) at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5155) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1412) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1402) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:748)Caused by: com.zaxxer.hikari.pool.HikariPool$PoolInitializationException: Failed to initialize pool: IO Exception: null [90028-199] at com.zaxxer.hikari.pool.HikariPool.checkFailFast(HikariPool.java:512) at com.zaxxer.hikari.pool.HikariPool.<init>(HikariPool.java:105) at com.zaxxer.hikari.HikariDataSource.<init>(HikariDataSource.java:71) at org.hibernate.hikaricp.internal.HikariCPConnectionProvider.configure(HikariCPConnectionProvider.java:59) ... 26 moreCaused by: org.h2.jdbc.JdbcSQLNonTransientException: IO Exception: null [90028-199] at org.h2.message.DbException.getJdbcSQLException(DbException.java:502) at org.h2.message.DbException.getJdbcSQLException(DbException.java:427) at org.h2.message.DbException.get(DbException.java:194) at org.h2.mvstore.db.MVTableEngine$Store.convertIllegalStateException(MVTableEngine.java:197) at org.h2.mvstore.db.MVTableEngine$Store.open(MVTableEngine.java:173) at org.h2.mvstore.db.MVTableEngine.init(MVTableEngine.java:95) at org.h2.engine.Database.getPageStore(Database.java:2739) at org.h2.engine.Database.open(Database.java:769) at org.h2.engine.Database.openDatabase(Database.java:319) at org.h2.engine.Database.<init>(Database.java:313) at org.h2.engine.Engine.openSession(Engine.java:69) at org.h2.engine.Engine.openSession(Engine.java:201) at org.h2.engine.Engine.createSessionAndValidate(Engine.java:178) at org.h2.engine.Engine.createSession(Engine.java:161) at org.h2.engine.Engine.createSession(Engine.java:31) at org.h2.engine.SessionRemote.connectEmbeddedOrServer(SessionRemote.java:336) at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:169) at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:148) at org.h2.Driver.connect(Driver.java:69) at com.zaxxer.hikari.util.DriverDataSource.getConnection(DriverDataSource.java:95) at com.zaxxer.hikari.util.DriverDataSource.getConnection(DriverDataSource.java:101) at com.zaxxer.hikari.pool.PoolBase.newConnection(PoolBase.java:341) at com.zaxxer.hikari.pool.HikariPool.checkFailFast(HikariPool.java:506) ... 29 moreCaused by: java.lang.IllegalStateException: Reading from nio:/Users/sergeyz/Documents/BAMBOO_HOME/database/h2.mv.db failed; file length 13529088 read length 3072 at 33753278 [1.4.199/1] at org.h2.mvstore.DataUtils.newIllegalStateException(DataUtils.java:883) at org.h2.mvstore.DataUtils.readFully(DataUtils.java:420) at org.h2.mvstore.FileStore.readFully(FileStore.java:98) at org.h2.mvstore.MVStore.readBufferForPage(MVStore.java:1048) at org.h2.mvstore.MVStore.readPage(MVStore.java:2186) at org.h2.mvstore.MVMap.readPage(MVMap.java:554) at org.h2.mvstore.Page$NonLeaf.getChildPage(Page.java:1086) at org.h2.mvstore.Cursor.hasNext(Cursor.java:53) at org.h2.mvstore.MVStore.readStoreHeader(MVStore.java:793) at org.h2.mvstore.MVStore.<init>(MVStore.java:401) at org.h2.mvstore.MVStore$Builder.open(MVStore.java:3343) at org.h2.mvstore.db.MVTableEngine$Store.open(MVTableEngine.java:162) ... 47 moreCaused by: java.io.EOFException at org.h2.mvstore.DataUtils.readFully(DataUtils.java:408) ... 57 more2021-02-24 09:53:24,494 ERROR [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 3 failedorg.hibernate.HibernateException: com.zaxxer.hikari.pool.HikariPool$PoolInitializationException: Failed to initialize pool: IO Exception: null [90028-199] at org.hibernate.hikaricp.internal.HikariCPConnectionProvider.configure(HikariCPConnectionProvider.java:63) at org.hibernate.boot.registry.internal.StandardServiceRegistryImpl.configureService(StandardServiceRegistryImpl.java:107) at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:246) at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:214) at com.atlassian.bamboo.upgrade.BootstrapTaskConnectionProvider.getConnectionProvider(BootstrapTaskConnectionProvider.java:30) at com.atlassian.bamboo.upgrade.BootstrapTaskConnectionProvider.getConnectionProvider(BootstrapTaskConnectionProvider.java:25) at com.atlassian.bamboo.upgrade.BootstrapTaskConnectionProvider.getConnection(BootstrapTaskConnectionProvider.java:68) at com.atlassian.bamboo.upgrade.utils.impl.BootstrapUpgradeHelper.getDatabaseConnection(BootstrapUpgradeHelper.java:45) at com.atlassian.bamboo.upgrade.tasks.validation.BuildNumberInHomeMatchesDatabase.getBuildNumberFromDatabase(BuildNumberInHomeMatchesDatabase.java:76) at com.atlassian.bamboo.upgrade.tasks.validation.BuildNumberInHomeMatchesDatabase.doUpgrade(BuildNumberInHomeMatchesDatabase.java:50) at com.atlassian.bamboo.upgrade.BootstrapUpgradeManagerImpl.runValidationTask(BootstrapUpgradeManagerImpl.java:134) at com.atlassian.bamboo.upgrade.BootstrapUpgradeManagerImpl.lambda$runValidationTasks$0(BootstrapUpgradeManagerImpl.java:93) at com.atlassian.bamboo.upgrade.AbstractUpgradeManager.forEachTask(AbstractUpgradeManager.java:147) at com.atlassian.bamboo.upgrade.BootstrapUpgradeManagerImpl.runValidationTasks(BootstrapUpgradeManagerImpl.java:93) at com.atlassian.bamboo.setup.DefaultBootstrapManager.runValidationTasks(DefaultBootstrapManager.java:392) at com.atlassian.bamboo.setup.DefaultBootstrapManager.performPersistenceUpgrade(DefaultBootstrapManager.java:296) at com.atlassian.config.bootstrap.DefaultAtlassianBootstrapManager.init(DefaultAtlassianBootstrapManager.java:81) at com.atlassian.bamboo.setup.BootstrapLoaderListener.contextInitialized(BootstrapLoaderListener.java:143) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4689) at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5155) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1412) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1402) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:748)Caused by: com.zaxxer.hikari.pool.HikariPool$PoolInitializationException: Failed to initialize pool: IO Exception: null [90028-199] at com.zaxxer.hikari.pool.HikariPool.checkFailFast(HikariPool.java:512) at com.zaxxer.hikari.pool.HikariPool.<init>(HikariPool.java:105) at com.zaxxer.hikari.HikariDataSource.<init>(HikariDataSource.java:71) at org.hibernate.hikaricp.internal.HikariCPConnectionProvider.configure(HikariCPConnectionProvider.java:59) ... 26 moreCaused by: org.h2.jdbc.JdbcSQLNonTransientException: IO Exception: null [90028-199] at org.h2.message.DbException.getJdbcSQLException(DbException.java:502) at org.h2.message.DbException.getJdbcSQLException(DbException.java:427) at org.h2.message.DbException.get(DbException.java:194) at org.h2.mvstore.db.MVTableEngine$Store.convertIllegalStateException(MVTableEngine.java:197) at org.h2.mvstore.db.MVTableEngine$Store.open(MVTableEngine.java:173) at org.h2.mvstore.db.MVTableEngine.init(MVTableEngine.java:95) at org.h2.engine.Database.getPageStore(Database.java:2739) at org.h2.engine.Database.open(Database.java:769) at org.h2.engine.Database.openDatabase(Database.java:319) at org.h2.engine.Database.<init>(Database.java:313) at org.h2.engine.Engine.openSession(Engine.java:69) at org.h2.engine.Engine.openSession(Engine.java:201) at org.h2.engine.Engine.createSessionAndValidate(Engine.java:178) at org.h2.engine.Engine.createSession(Engine.java:161) at org.h2.engine.Engine.createSession(Engine.java:31) at org.h2.engine.SessionRemote.connectEmbeddedOrServer(SessionRemote.java:336) at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:169) at org.h2.jdbc.JdbcConnection.<init>(JdbcConnection.java:148) at org.h2.Driver.connect(Driver.java:69) at com.zaxxer.hikari.util.DriverDataSource.getConnection(DriverDataSource.java:95) at com.zaxxer.hikari.util.DriverDataSource.getConnection(DriverDataSource.java:101) at com.zaxxer.hikari.pool.PoolBase.newConnection(PoolBase.java:341) at com.zaxxer.hikari.pool.HikariPool.checkFailFast(HikariPool.java:506) ... 29 moreCaused by: java.lang.IllegalStateException: Reading from nio:/Users/sergeyz/Documents/BAMBOO_HOME/database/h2.mv.db failed; file length 13529088 read length 3072 at 33753278 [1.4.199/1] at org.h2.mvstore.DataUtils.newIllegalStateException(DataUtils.java:883) at org.h2.mvstore.DataUtils.readFully(DataUtils.java:420) at org.h2.mvstore.FileStore.readFully(FileStore.java:98) at org.h2.mvstore.MVStore.readBufferForPage(MVStore.java:1048) at org.h2.mvstore.MVStore.readPage(MVStore.java:2186) at org.h2.mvstore.MVMap.readPage(MVMap.java:554) at org.h2.mvstore.Page$NonLeaf.getChildPage(Page.java:1086) at org.h2.mvstore.Cursor.hasNext(Cursor.java:53) at org.h2.mvstore.MVStore.readStoreHeader(MVStore.java:793) at org.h2.mvstore.MVStore.<init>(MVStore.java:401) at org.h2.mvstore.MVStore$Builder.open(MVStore.java:3343) at org.h2.mvstore.db.MVTableEngine$Store.open(MVTableEngine.java:162) ... 47 moreCaused by: java.io.EOFException at org.h2.mvstore.DataUtils.readFully(DataUtils.java:408) ... 57 more2021-02-24 09:53:24,503 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -----------------------------------------2021-02-24 09:53:24,503 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 4 : Verify Java compatibility (bootstrap)2021-02-24 09:53:24,503 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -----------------------------------------2021-02-24 09:53:24,503 INFO [localhost-startStop-1] [JavaVersionIsSupported] Testing compatibility of Java version 1.8.0_281 with this version of Bamboo.2021-02-24 09:53:24,503 INFO [localhost-startStop-1] [JavaVersionIsSupported] Detected Java version 1.8.0_281, your version is supported.2021-02-24 09:53:24,503 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 4 completed successfully.2021-02-24 09:53:24,512 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -----------------------------------------------------------------2021-02-24 09:53:24,512 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 2901 : Test if build number is applicable for upgrade (bootstrap)2021-02-24 09:53:24,512 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -----------------------------------------------------------------2021-02-24 09:53:24,512 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 2901 completed successfully.2021-02-24 09:53:24,520 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ------------------------------------------------------------2021-02-24 09:53:24,520 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 2902 : Test if plan keys are correctly formatted (bootstrap)2021-02-24 09:53:24,520 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ------------------------------------------------------------2021-02-24 09:53:24,522 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 2902 completed with errors.2021-02-24 09:53:24,529 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -----------------------------------------------------------------------------2021-02-24 09:53:24,529 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 4300 : Make sure there's single row in HIBERNATE_UNIQUE_KEY table (bootstrap)2021-02-24 09:53:24,529 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -----------------------------------------------------------------------------2021-02-24 09:53:24,531 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 4300 completed with errors.2021-02-24 09:53:24,539 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -------------------------------------------------------------------------------------2021-02-24 09:53:24,539 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 4410 : Make sure that all branch keys start with their master's chain key (bootstrap)2021-02-24 09:53:24,539 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -------------------------------------------------------------------------------------2021-02-24 09:53:24,542 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 4410 completed with errors.2021-02-24 09:53:24,555 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------2021-02-24 09:53:24,555 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 51010 : Check if lucene index root dir exists (bootstrap)2021-02-24 09:53:24,555 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------2021-02-24 09:53:24,555 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 51010 completed successfully.2021-02-24 09:53:24,568 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -----------------------------------------------------------------------------2021-02-24 09:53:24,568 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 51012 : Make sure that MySQL server uses InnoDB engine for tables (bootstrap)2021-02-24 09:53:24,568 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -----------------------------------------------------------------------------2021-02-24 09:53:24,572 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 51012 completed successfully.2021-02-24 09:53:24,582 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] --------------------------------------------------------------------------2021-02-24 09:53:24,582 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 51102 : Make sure server key has been initialized and is valid (bootstrap)2021-02-24 09:53:24,582 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] --------------------------------------------------------------------------2021-02-24 09:53:24,582 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 51102 completed successfully.2021-02-24 09:53:24,591 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -------------------------------------------2021-02-24 09:53:24,591 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 51111 : Verify DB compatibility (bootstrap)2021-02-24 09:53:24,591 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -------------------------------------------2021-02-24 09:53:24,591 ERROR [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 51111 failedjava.lang.NullPointerException at com.atlassian.bamboo.upgrade.tasks.validation.DatabaseIsSupported.getDatabaseMetadata(DatabaseIsSupported.java:139) at com.atlassian.bamboo.upgrade.tasks.validation.DatabaseIsSupported.doUpgrade(DatabaseIsSupported.java:65) at com.atlassian.bamboo.upgrade.BootstrapUpgradeManagerImpl.runValidationTask(BootstrapUpgradeManagerImpl.java:134) at com.atlassian.bamboo.upgrade.BootstrapUpgradeManagerImpl.lambda$runValidationTasks$0(BootstrapUpgradeManagerImpl.java:93) at com.atlassian.bamboo.upgrade.AbstractUpgradeManager.forEachTask(AbstractUpgradeManager.java:147) at com.atlassian.bamboo.upgrade.BootstrapUpgradeManagerImpl.runValidationTasks(BootstrapUpgradeManagerImpl.java:93) at com.atlassian.bamboo.setup.DefaultBootstrapManager.runValidationTasks(DefaultBootstrapManager.java:392) at com.atlassian.bamboo.setup.DefaultBootstrapManager.performPersistenceUpgrade(DefaultBootstrapManager.java:296) at com.atlassian.config.bootstrap.DefaultAtlassianBootstrapManager.init(DefaultAtlassianBootstrapManager.java:81) at com.atlassian.bamboo.setup.BootstrapLoaderListener.contextInitialized(BootstrapLoaderListener.java:143) at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4689) at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5155) at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1412) at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1402) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:748)2021-02-24 09:53:24,599 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------2021-02-24 09:53:24,599 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 51210 : Verify file name encoding (bootstrap)2021-02-24 09:53:24,599 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------2021-02-24 09:53:24,603 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 51210 completed successfully.2021-02-24 09:53:24,611 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------2021-02-24 09:53:24,611 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 51301 : Test if collation and commit isolation is set correctly (bootstrap)2021-02-24 09:53:24,611 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------2021-02-24 09:53:24,611 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 51301 completed successfully.2021-02-24 09:53:24,619 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ----------------------------------------------------------------2021-02-24 09:53:24,619 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 51302 : Check that MySQL tables are case insensitive (bootstrap)2021-02-24 09:53:24,619 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ----------------------------------------------------------------2021-02-24 09:53:24,620 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 51302 completed with errors.2021-02-24 09:53:24,629 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------------------2021-02-24 09:53:24,629 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 51404 : Make sure OSGi bundle cache directory is empty, clean it if needed. (bootstrap)2021-02-24 09:53:24,629 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------------------2021-02-24 09:53:24,643 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 51404 completed successfully.2021-02-24 09:53:24,651 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -------------------------------------------------------------------2021-02-24 09:53:24,651 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 60001 : Make sure JNDI location of mail server is valid (bootstrap)2021-02-24 09:53:24,651 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] -------------------------------------------------------------------2021-02-24 09:53:24,652 INFO [localhost-startStop-1] [MailServerJndiLocationIsValid] Validating JNDI location of mail server in configuration file '/Users/sergeyz/Documents/BAMBOO_HOME/bamboo-mail.cfg.xml'.2021-02-24 09:53:24,704 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 60001 completed successfully.2021-02-24 09:53:24,722 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------------------------2021-02-24 09:53:24,723 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 60601 : Validate existing Atlassian User directories for Embedded Crowd migration (bootstrap)2021-02-24 09:53:24,723 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------------------------2021-02-24 09:53:24,725 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 60601 completed with errors.2021-02-24 09:53:24,733 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------------------------2021-02-24 09:53:24,734 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 60602 : Validate existing Atlassian User directories for Embedded Crowd migration (bootstrap)2021-02-24 09:53:24,734 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------------------------2021-02-24 09:53:24,734 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 60602 completed with errors.2021-02-24 09:53:24,742 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------2021-02-24 09:53:24,742 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] 70110 : Verify that bamboo.cfg.xml exists and can be written to (bootstrap)2021-02-24 09:53:24,742 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] ---------------------------------------------------------------------------2021-02-24 09:53:24,742 INFO [localhost-startStop-1] [BootstrapUpgradeManagerImpl] Task 70110 completed successfully.2021-02-24 09:53:24,743 FATAL [localhost-startStop-1] [DefaultBootstrapManager] Validation tests failed: [Task 3 failed with exception: com.zaxxer.hikari.pool.HikariPool$PoolInitializationException: Failed to initialize pool: IO Exception: null [90028-199], Task 2902 failed:, Cannot open DB connection, Task 4300 failed:, Cannot open DB connection, Task 4410 failed:, Cannot open DB connection, Task 51111 failed with exception: null, Task 51302 failed:, Cannot open DB connection, Task 60601 failed:, Cannot open DB connection, Task 60602 failed:, Cannot open DB connection]2021-02-24 09:53:24,797 FATAL [localhost-startStop-1] [DefaultBootstrapManager] Validation tests failed: Your Bamboo instance could not start because health check failed. Contact Atlassian Support at https://support.atlassian.com2021-02-24 09:53:24,798 INFO [localhost-startStop-1] [lifecycle] Bamboo home directory: /Users/sergeyz/Documents/BAMBOO_HOME2021-02-24 09:53:24,799 INFO [localhost-startStop-1] [lifecycle] Default charset: UTF-8, file name ecoding: UTF-82021-02-24 09:53:24,812 INFO [localhost-startStop-1] [UpgradeLauncher] Upgrades not performed since the application has not been set up yet.2021-02-24 09:53:24,852 INFO [localhost-startStop-1] [CompressingFilter] CompressingFilter has initialized2021-02-24 09:53:25,881 INFO [localhost-startStop-1] [SpringObjectFactoryProxy] Deferring initialisation of com.atlassian.bamboo.plugin.xwork.SpringObjectFactoryProxy2021-02-24 09:53:27,857 INFO [localhost-startStop-1] [Dispatchers] Dispatcher org.apache.struts2.dispatcher.Dispatcher initialised2021-02-24 09:53:28,024 INFO [localhost-startStop-1] [SpringObjectFactoryProxy] Deferring initialisation of com.atlassian.bamboo.plugin.xwork.SpringObjectFactoryProxy2021-02-24 09:53:29,265 INFO [localhost-startStop-1] [SpringObjectFactoryProxy] Deferring initialisation of com.atlassian.bamboo.plugin.xwork.SpringObjectFactoryProxy2021-02-24 09:53:29,433 INFO [localhost-startStop-1] [Dispatchers] Dispatcher org.apache.struts2.dispatcher.Dispatcher initialised2021-02-24 09:53:29,522 INFO [localhost-startStop-1] [SpringObjectFactoryProxy] Deferring initialisation of com.atlassian.bamboo.plugin.xwork.SpringObjectFactoryProxy2021-02-24 09:53:43,517 INFO [http-nio-8085-exec-1] [JohnsonFilter] The application is still starting up, or there are errors. Redirecting request from '/start.action' to '/error/errorEvents.action'2021-02-24 09:53:45,226 INFO [http-nio-8085-exec-3] [JohnsonFilter] The application is still starting up, or there are errors. Redirecting request from '/apple-touch-icon-precomposed.png' to '/error/errorEvents.action'2021-02-24 09:53:45,276 INFO [http-nio-8085-exec-5] [JohnsonFilter] The application is still starting up, or there are errors. Redirecting request from '/apple-touch-icon.png' to '/error/errorEvents.action'

 



1 answer

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Gonchik Tsymzhitov
Community Leader
Community Leader
Community Leaders are connectors, ambassadors, and mentors. On the online community, they serve as thought leaders, product experts, and moderators.
February 24, 2021

Hi @Deep Shadows Games , 

based on your logs something wrong wit h2db

BootstrapUpgradeHelper] Error getting database connectionorg.hibernate.HibernateException: com.zaxxer.hikari.pool.HikariPool$PoolInitializationException: Failed to initialize pool: IO Exception: null [90028-199] at

 

Could you  verify that bamboo.cfg.xml with db connection ? I am quite confused with lines related MySQL. 

Did you use the embedded database or external one ?

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