It's a SourceTree limitation, SourceTree needs to build a patch file in order to manipulate the diff on a line level, and non-contiguous line selections make that a lot less reliable. Instead of selecting 2 non-contiguous areas of the file though you can just select a single area at a time and stage that instead.
[Note: So it was my turn for Friday Fun and sadly I was sick thanks to rubbish sinus infection... so apologies to most of Europe and Asia for the delayed post. However, I finally got out of bed for t...
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