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I "upgraded" fisheye, but the system does not use the original config.xml file which has all of the license keys, repositories, and DB information.
How do I force it to use this file?
Have you set the FISHEYE_INST environment variable? I've set up Crucible under Linux recently, and found that the config.xml file in the Crucible server folder was a complete waste of space, because all configs about web-ports, repos etc. are read from the config.xml in the folder defined by the above mentioned variable.
Maybe the variable was changed during the upgrade?