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In the config.xml is it
<include tree="master" casesensitive="false"/>
<include tree="/master" casesensitive="false"/>
<include tree="master/*" casesensitive="false"/>
Each time I rescan the repo shows all commits with 0 files changed.
As I understand, you would like Fisheye to index only the master branch of your repository.
At the moment, it is not possible to include/exclude specific git branches in a repository in Fisheye, only specific paths/directories.
There is a feature request for this functionality, which you can follow at:
You can add your comments there and outline your specific use-case.
Hope this helps!