It doesn't really matter, both local and domain users would be equally fine. There are some recommendations regarding Crucible user: https://confluence.atlassian.com/display/FISHEYE/Installing+FishEye+on+Windows#InstallingFishEyeonWindows-4.dedicated_fisheye_userCreateadedicatedFishEyeuser(recommended). If you are concerned about security may also want to follow this: https://confluence.atlassian.com/display/FISHEYE/Best+practices+for+configuring+FishEye+security
Hope that helps,
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