Does Fisheye/Crucible work with Jira data center edition? I found no mention of data center in the Fisheye docs and I haven't been able to find an answer elsewhere yet either.
It does work regardless it is a DC or not, it doesn't really matter what kind of the application (standalone or DC) is "behind" the URL, only proper app configuration matters so applinks will work properly.
Put it simple "Datacenter" is only related to the application itself in terms of resilience and workload distribution.
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