Problem configuring Bamboo

[Pedro Costa]

Hello,

System details:

CPU: 4vCore

RAM: 4Gb

Storage: 30Gb

Ubuntu 18.04 LTS

DB: Mysql 5.7

When I try to  configure Bamboo, after being installed, i'm getting the error bellow as soon as I try to set up the database:

2019-02-22 15:05:38,559 WARN [http-nio-8085-exec-11] [TokenHelper] Could not find token mapped to token name: token
2019-02-22 15:05:39,700 WARN [performSetupDatabaseConnectionBackgroundThread] [GenericTypeAwarePropertyDescriptor] Invalid JavaBean property 'mappingResources' being accessed! Ambiguous write methods found next to actually used [public void bucket.core.persistence.hibernate.ConfigurableLocalSessionFactoryBean.setMappingResources(bucket.core.persistence.hibernate.MappingResources)]: [public void org.springframework.orm.hibernate5.LocalSessionFactoryBean.setMappingResources(java.lang.String[])]
2019-02-22 15:05:39,806 WARN [performSetupDatabaseConnectionBackgroundThread] [XmlWebApplicationContext] Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'reloadableBeanFactories' defined in class path resource [applicationContextPlugin.xml]: BeanPostProcessor before instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.transaction.config.internalTransactionAdvisor': Cannot resolve reference to bean 'org.springframework.transaction.annotation.AnnotationTransactionAttributeSource#0' while setting bean property 'transactionAttributeSource'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.transaction.annotation.AnnotationTransactionAttributeSource#0': BeanPostProcessor before instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'customBuildCompleteActionAdvisor' defined in class path resource [applicationContextManagers.xml]: Cannot resolve reference to bean 'hibernateInterceptor' while setting bean property 'advice'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'hibernateInterceptor' defined in class path resource [applicationContextPersistence.xml]: Cannot resolve reference to bean 'sessionFactory' while setting bean property 'sessionFactory'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'sessionFactory' defined in class path resource [applicationContextPersistence.xml]: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException
2019-02-22 15:05:39,807 ERROR [performSetupDatabaseConnectionBackgroundThread] [ContextLoader] Context initialization failed
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'reloadableBeanFactories' defined in class path resource [applicationContextPlugin.xml]: BeanPostProcessor before instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.transaction.config.internalTransactionAdvisor': Cannot resolve reference to bean 'org.springframework.transaction.annotation.AnnotationTransactionAttributeSource#0' while setting bean property 'transactionAttributeSource'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.transaction.annotation.AnnotationTransactionAttributeSource#0': BeanPostProcessor before instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'customBuildCompleteActionAdvisor' defined in class path resource [applicationContextManagers.xml]: Cannot resolve reference to bean 'hibernateInterceptor' while setting bean property 'advice'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'hibernateInterceptor' defined in class path resource [applicationContextPersistence.xml]: Cannot resolve reference to bean 'sessionFactory' while setting bean property 'sessionFactory'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'sessionFactory' defined in class path resource [applicationContextPersistence.xml]: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:490)
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:317)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:315)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:204)
at org.springframework.context.support.PostProcessorRegistrationDelegate.registerBeanPostProcessors(PostProcessorRegistrationDelegate.java:236)
at org.springframework.context.support.AbstractApplicationContext.registerBeanPostProcessors(AbstractApplicationContext.java:710)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:535)
at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:409)
at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:291)
at com.atlassian.config.spring.BootstrappedContainerContext.refresh(BootstrappedContainerContext.java:22)
at com.atlassian.bamboo.setup.DefaultHibernateConfigurator.refreshSpringContextAndCreateDatabase(DefaultHibernateConfigurator.java:120)
at com.atlassian.bamboo.setup.DefaultHibernateConfigurator.configureDatabase(DefaultHibernateConfigurator.java:63)
at com.atlassian.config.bootstrap.DefaultAtlassianBootstrapManager.bootstrapDatabase(DefaultAtlassianBootstrapManager.java:258)
at com.atlassian.bamboo.ww2.actions.setup.SetupUtilityBean.setupStandardDatabase(SetupUtilityBean.java:187)
at com.atlassian.bamboo.ww2.actions.setup.SetupDatabaseConnectionAction.execute(SetupDatabaseConnectionAction.java:87)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at ognl.OgnlRuntime.invokeMethod(OgnlRuntime.java:899)
at ognl.OgnlRuntime.callAppropriateMethod(OgnlRuntime.java:1544)
at ognl.ObjectMethodAccessor.callMethod(ObjectMethodAccessor.java:68)
at com.opensymphony.xwork2.ognl.accessor.XWorkMethodAccessor.callMethodWithDebugInfo(XWorkMethodAccessor.java:98)
at com.opensymphony.xwork2.ognl.accessor.XWorkMethodAccessor.callMethod(XWorkMethodAccessor.java:90)
at ognl.OgnlRuntime.callMethod(OgnlRuntime.java:1620)
at ognl.ASTMethod.getValueBody(ASTMethod.java:91)
at ognl.SimpleNode.evaluateGetValueBody(SimpleNode.java:212)
at ognl.SimpleNode.getValue(SimpleNode.java:258)
at ognl.Ognl.getValue(Ognl.java:470)
at ognl.Ognl.getValue(Ognl.java:434)
at com.opensymphony.xwork2.ognl.OgnlUtil$3.execute(OgnlUtil.java:401)
at com.opensymphony.xwork2.ognl.OgnlUtil.compileAndExecuteMethod(OgnlUtil.java:453)
at com.opensymphony.xwork2.ognl.OgnlUtil.callMethod(OgnlUtil.java:399)
at com.opensymphony.xwork2.DefaultActionInvocation.invokeAction(DefaultActionInvocation.java:438)
at com.opensymphony.xwork2.DefaultActionInvocation.invokeActionOnly(DefaultActionInvocation.java:293)
at org.apache.struts2.interceptor.BackgroundProcess$1.run(BackgroundProcess.java:55)
at java.base/java.lang.Thread.run(Thread.java:834)
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.transaction.config.internalTransactionAdvisor': Cannot resolve reference to bean 'org.springframework.transaction.annotation.AnnotationTransactionAttributeSource#0' while setting bean property 'transactionAttributeSource'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.transaction.annotation.AnnotationTransactionAttributeSource#0': BeanPostProcessor before instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'customBuildCompleteActionAdvisor' defined in class path resource [applicationContextManagers.xml]: Cannot resolve reference to bean 'hibernateInterceptor' while setting bean property 'advice'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'hibernateInterceptor' defined in class path resource [applicationContextPersistence.xml]: Cannot resolve reference to bean 'sessionFactory' while setting bean property 'sessionFactory'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'sessionFactory' defined in class path resource [applicationContextPersistence.xml]: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:378)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:110)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1602)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1354)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:572)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:495)
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:317)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:315)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:204)
at org.springframework.aop.framework.autoproxy.BeanFactoryAdvisorRetrievalHelper.findAdvisorBeans(BeanFactoryAdvisorRetrievalHelper.java:91)
at org.springframework.aop.framework.autoproxy.AbstractAdvisorAutoProxyCreator.findCandidateAdvisors(AbstractAdvisorAutoProxyCreator.java:109)
at org.springframework.aop.aspectj.annotation.AnnotationAwareAspectJAutoProxyCreator.findCandidateAdvisors(AnnotationAwareAspectJAutoProxyCreator.java:92)
at org.springframework.aop.aspectj.autoproxy.AspectJAwareAdvisorAutoProxyCreator.shouldSkip(AspectJAwareAdvisorAutoProxyCreator.java:101)
at org.springframework.aop.framework.autoproxy.AbstractAutoProxyCreator.postProcessBeforeInstantiation(AbstractAutoProxyCreator.java:254)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyBeanPostProcessorsBeforeInstantiation(AbstractAutowireCapableBeanFactory.java:1060)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.resolveBeforeInstantiation(AbstractAutowireCapableBeanFactory.java:1033)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:484)
... 37 more
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'org.springframework.transaction.annotation.AnnotationTransactionAttributeSource#0': BeanPostProcessor before instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'customBuildCompleteActionAdvisor' defined in class path resource [applicationContextManagers.xml]: Cannot resolve reference to bean 'hibernateInterceptor' while setting bean property 'advice'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'hibernateInterceptor' defined in class path resource [applicationContextPersistence.xml]: Cannot resolve reference to bean 'sessionFactory' while setting bean property 'sessionFactory'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'sessionFactory' defined in class path resource [applicationContextPersistence.xml]: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:490)
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:317)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:315)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:199)
at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:367)
... 54 more
Continue....

Thank you for your help.

Regards,

Pedro Costa

[Daniel Santos]

Hi @Pedro Costa

Can you please check if you are using the correct JAVA version (probably JAVA 1.8) depending on your Bamboo installation? 

In case you are, can you please check what is the first error or warning you get when you start Bamboo? if there is any happening before the logs you shared.