Hi,
It's really hard to tell what's the reason of those errors looking at the Repositories screen. You could go to repository details and see what's the detailed status there or look into Fisheye logs.
That said, if you're not sure what's going on, feel free to contact Atlassian Support via getsupport.atlassian.com.
Best Regards,
Mikołaj Żyromski (Atlassian)
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