If you have thousands of comments and you can't break up the pages into smaller parts, then your pages are not really documentation any more, and it's probably worth exploring other routes of communication.
Our docs often go through revisions which build up a couple of hundred comments, and there's no problem with that, but it sounds like you're heading into the thousands/
At this point, you probably need to be looking at forum or q&a software. Have a look at the Confluence Questions add-on as a way to have that conversation, or consider something like Stride or Hipchat for getting people talking.
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