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claude code with jira MCP constant fail!!!

Dean Hiller
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October 7, 2025

From claude code side, I have it working with ALL MCP servers I want(sentry, playwright, firestore) EXCEPT jira MCP server which constantly says 

 

"> /mcp
⎿  Authentication successful, but server reconnection failed. You may need to manually restart Claude Code for the changes to take effect."

I restart and still does not work.

 

On the flipside, claude.ai works fine but I think uses a different auth process with atlassian perhaps?    so the atlassian MCP server works!!! but only on claude.ai

 

soooo, is this a jira atlassian MCP server bug for auth or a claude code bug.  linking claude code issue -> https://github.com/anthropics/claude-code/issues/9127

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