We have the same question/concern as our team often needs to store senstive data in JIRA - so we decided to build our own solution.
We are an Atlassian Solution Partner and we've just released something that might help. It's called Team Secrets and it protects sensitive file attachments in JIRA with end-to-end encryption for attachment uploads and 2 factor verification for downloads.
Please try it and let us know if this helps!
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