I'm fairly confident that this isn't a critical issue, however, I felt you folks should be aware that after running ClamshellAV on CentOS 7, the following appeared in my log (for what seems directly related to 'plugins' packages for JIRA and Bitbucket servers):
/opt/atlassian/jira/atlassian-jira/WEB-INF/atlassian-bundled-plugins/atlassian-universal-plugin-manager-plugin-2.22.9.jar: Html.Malware.Agent-6625161-0 FOUND
/opt/atlassian/jira/atlassian-jira/WEB-INF/atlassian-bundled-plugins/upm-application-plugin-2.22.9.jar: Html.Malware.Agent-6625161-0 FOUND
/opt/atlassian/jira/temp/plugin.7678726411037657193.atlassian-universal-plugin-manager-plugin-2.22.12.jar: Html.Malware.Agent-6625161-0 FOUND
/opt/atlassian/jira/temp/plugin.1235045691871667837.atlassian-universal-plugin-manager-plugin-2.22.11.jar: Html.Malware.Agent-6625161-0 FOUND
/opt/atlassian/bitbucket/5.11.1/app/WEB-INF/atlassian-bundled-plugins/atlassian-universal-plugin-manager-plugin-2.22.9.jar: Html.Malware.Agent-6625161-0 FOUND
/var/atlassian/application-data/jira/plugins/installed-plugins/plugin.7678726411037657193.atlassian-universal-plugin-manager-plugin-2.22.12.jar: Html.Malware.Agent-6625161-0 FOUND
/var/atlassian/application-data/jira/plugins/.osgi-plugins/transformed-plugins/atlassian-universal-plugin-manager-plugin-2.22.9_1530114812000.jar: Html.Malware.Agent-6625161-0 FOUND
/var/atlassian/application-data/jira/plugins/.osgi-plugins/transformed-plugins/upm-application-plugin-2.22.9_1530114812000.jar: Html.Malware.Agent-6625161-0 FOUND
/var/atlassian/application-data/jira/plugins/.osgi-plugins/transformed-plugins/plugin.1235045691871667837.atlassian-universal-plugin-manager-plugin-2.22.11_1530732163000.jar: Html.Malware.Agent-6625161-0 FOUND
/var/atlassian/application-data/jira/plugins/.osgi-plugins/transformed-plugins/plugin.7678726411037657193.atlassian-universal-plugin-manager-plugin-2.22.12_1532789555000.jar: Html.Malware.Agent-6625161-0 FOUND
/var/atlassian/application-data/bitbucket/plugins/.osgi-cache/transformed-plugins/atlassian-universal-plugin-manager-plugin-2.22.9_1527316560000.jar: Html.Malware.Agent-6625161-0 FOUND