I have followed your example on the documents (https://confluence.atlassian.com/display/DOC/Using+Apache+with+mod_proxy#UsingApachewithmod_proxy-complex) to the tee and I am not seeing the jira or confluence installations come up.
My apache conf includes the following:
<VirtualHost 99.198.122.241:80>
ServerName wiki.darkprospect.net
ProxyRequests Off
<Proxy *>
Order deny,allow
Allow from all
</Proxy>
ProxyPass / http://localhost:8090/
ProxyPassReverse / http://localhost:8090/
<Location />
Order allow,deny
Allow from all
</Location>
</VirtualHost>
<VirtualHost 99.198.122.241:80>
ServerName jira.darkprospect.net
ProxyRequests Off
<Proxy *>
Order deny,allow
Allow from all
</Proxy>
ProxyPass / http://localhost:8080/
ProxyPassReverse / http://localhost:8080/
<Location />
Order allow,deny
Allow from all
</Location>
</VirtualHost>
The answer ended up being so simple that I laughed when I figured it out. Jira's guide specifies `<VirtualHost *>` as the needed name however when I altered the file to `<VirtualHost 99.198.122.241:80>` it works just fine. Chose the answer that was closest to my answer figured out.