I have added ciphers to the Connector in our conf/server.xml configuration as I wanted to limit TLS to 256-bit ciphers of AES. Our Atlassian Jira instance is using RC4_128 with SHA1 and ECDHE_RSA key exchange. The certificate supports 256-bit keys.
Adding the ciphers did not help. It is still using the RC4_128 algorithm.
<Connector SSLEnabled="true" acceptCount="100" clientAuth="false" connectionTimeout="20000" disableUploadTimeout="true" enableLookups="false" keyAlias="alias" keystoreFile="/
home/jira/.keystore" keystorePass="*********" keystoreType="JKS" maxHttpHeaderSize="8192" maxSpareThreads="75" maxThreads="150" minSpareThreads="25" port="8443" protocol="org.apache.coyo
te.http11.Http11Protocol" scheme="https" secure="true" sslProtocol="TLS" useBodyEncodingForURI="true" ciphers="TLS_ECDH_RSA_WITH_AES_256_CBC_SHA, TLS_ECDHE_ECDSA_WITH_AES_256_CBC_SHA, T
LS_ECDHE_RSA_WITH_AES_256_CBC_SHA" />
The ciphers where taken from:
https://confluence.atlassian.com/display/JIRAKB/Default+SSL+ciphers+too+weak