What is the difference in Jira Issue Updater Plugin and JIRA Plugin
You'll need to explain what you mean. There are loads of JIRA Issue updater addons - both for JIRA and for other systems that want to update JIRA issues. As for "JIRA Plugin" - there's thousands of those. Which one(s) do you mean?
If you're referencing the two JIRA plugins in Jenkins, one provides an integration between JIRA issues and the builds that mention them, the other (Updater) lets you update issues as part of a build (with build steps)
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