Hey All!
So interesting issue, the LDAP configuration is the same for our JIRA and Confluence (which are application linked). However I did create the groups in AD after I created them locally for JIRA, once I did them in AD - Confluence ( I did not create local groups originally in Confluence) was able to sync and grab them. When I deleted those groups (same name btw) from the internal JIRA group, they won't pull from AD. I even ran a resync on that user directory.
Any thoughts as why I can't get them to sync on JIRA, hopefully, it's not because they were a local group first. That would be crazy if it wouldn't sync because of that. User Directory for each JIRA and Confluence is Read Only w/ Local Groups. Its just odd that Confluence pulled the groups without issue.