https://confluence.atlassian.com/crowd/configuring-an-ssl-certificate-for-microsoft-active-directory-63504388.html
Under UNIX paragraph 2.
Is the path after -keystore right?
For me it was -keystore ./lib/security/cacerts -file
That is a relative path that might unfold wrong if the software using it have another path in mind. Try to use absolute paths like /opt/atlassian/crowd.x.y.z/jre/security/cacerts will protect you from this, i.e goto the folder in the cli and type "pwd"
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