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Changes and renames not listed in "pending"

Edited

I have a bunch of new files and renames that do not show in the "pending files" unstaged box.

Git status shows them:

$ git status
On branch feature/...
Your branch is ahead of 'origin/feature/...' by 2 commits.
(use "git push" to publish your local commits)

Changes to be committed:
(use "git restore --staged <file>..." to unstage)
modified: configurator/configurator.pro
modified: configurator/ui-widgets/...
modified: configurator/ui-widgets/...
modified: doc/...

Changes not staged for commit:
(use "git add <file>..." to update what will be committed)
(use "git restore <file>..." to discard changes in working directory)
(commit or discard the untracked or modified content in submodules)
renamed: configurator/communication/...
renamed: configurator/communication/...
new file: configurator/communication/...
new file: configurator/communication/...
new file: configurator/communication/...
new file: configurator/communication/...
renamed: configurator/communication/...
renamed: configurator/communication/...
modified: configurator/database (modified content, untracked content)

Untracked files:
(use "git add <file>..." to include in what will be committed)
target/

 Output from sourcetree log shows them:

R configurator/communication/... -> configurator/communication/...
R configurator/communication/... -> configurator/communication/...
A configurator/communication/...
A configurator/communication/...
A configurator/communication/...
A configurator/communication/...
R configurator/communication/... -> configurator/communication/...
R configurator/communication/... -> configurator/communication/...
M configurator/...
M configurator/...
M configurator/...
M "doc/..."
?? target/STM32F1/

Sourcetree doesn't show them. The view is set to"pending files, sorted by name".

They are shown when set to "all", but that list is very big.

 

What am I doing wrong?

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