I changed my folder locations where I wanted my files to be.
But I can no longer open the window, where I have, push/pull options.
Do I have to make new repo again, clone new one and then copy all files to a new folder?
So, if I understand this correctly, you moved your local repository to a different location correct? If so, try and delete the bookmark in Sourcetree (right-click on it and select Remove bookmark from folder). Then click Add and select the new location of your repository. Hopefully that will do the trick.
When you moved it, did you move everything in the repository or just parts of it? The most likely reason Sourcetree does not see it as a repository is because it is missing the .git directory. This directory contains everything that Git needs, and it must be in the root of your repository.
Where the repository is locally has not affect, as long as the root contains the .git directory. So you could when you first clone the repository put it under your www directory if you want.
If you go to the repository on the command line and run git status what does it return?
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