With IntelliJ Ultimate 11 RC1 (64-bit Windows) the IDE hangs on startup when the Atlassian IDE connector is installed. Removing this plugin resolves the problem. I've tried deleting the configuration but that doesn't help.
Under Windows XP 64-bit, service pack 1, + Idea 11.0 RC2 Connector works.
Could you try now latest IDEA 11.0 RC2 version?
The stack trace you included is a Secure Password Storage in IDEA (which we use in plugin).
But I guess some dialog window is invoked.
Please try RC2
It's Windows XP Professional 64-bit SP2. The only things I'm seeing that are from the Atlassian plugin are:
2011-12-05 15:02:53,156  INFO - com.atlassian.theplugin - Error checking new version: Connection error while retrieving the latest plugin version.
2011-12-05 15:04:16,484  INFO - com.atlassian.theplugin - ERROR:Cannot write private shared config file
The problem doesn't occur if I have the plugin installed but haven't configured any JIRA servers and it will operate when I configure the server during a session. It only seems to have an issue when the IDE is starting up. Our environment is a typical corporate one in that we have a JIRA server hosted on our LAN but sit behind a HTTP proxy for Internet access so I have the proxy configured but have enabled the proxy bypass in the plugin configuration. This issue doesn't occur at all in the same environment and identical configuration when using IDEA 10.5.3.
I took the 3.0.4 snapshot from the plugin repository but that didn't help. I did find the following in all the thread dumps:
"ApplicationImpl pooled thread 2" prio=0 tid=0x0 nid=0x0 waiting on condition
at java.lang.Object.wait(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
(truncated due to message size limit)
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