I personally haven't encountered this issue, so forgive me, if I can't help you with this very problem.
However, may I suggest NOT to use inline scripts at all? What I like to do, is to keep all my scripts in jiraHome/scripts directory and simply specify a path to a relevant file in my scripted fields, listeners, postfunctions, etc. Furthermore, using a version control system (like Git or Subversion) to store all your code will help you easily restore it, in case something goes wrong.
Hope this helps.
This month the spotlight is on AppLiger. We caught up with Pavel Pavlovsky, CEO and Product Manager, to learn how the company started and what fuels the team's creativity. Atlassian:...
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