Ok, fixing them is a bit of a pain if you can't reopen them.
Option 1: Add a transition from Done to Done (possibly with the condition "only admin") and have that also have the screen or post-function to set the resolution
Option 2: TEMPORARILY while no-one else is using JIRA, add "resolution" to the edit screen. You must remove it after you've corrected the issues though
With either of these fixes, you then use bulk-edit to transtion/edit and set the resolution.
Ok, your workflow is missing functions as Joe said earlier. You need to make sure your workflow transitions into all the status that are "done" have either a transition screen with resolution on it, OR they all have a post-function that says "set resolution to <something>" (Also, remember to add "set resolution to none" on transitions from "done" to "not-done")
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