as of now there is no limit to link issue, if this option should be there in jira then vote up here
i don't think it will be good to have 5k issue linked to one issue and i am not sure why so many issues need to link it to one issue
I would say there is a limit
I have a test system JIRA 7.3.1
I just found a ticket with over 38,000 Issue Links (affected by workflow)
This ticket is now experincing extreme issues,
Just opening the issue within Internet Explorer affected my local windows system to use over 1.5GB of memory before losing connection with the JIRA system
I am still attempting to delete the issue and remove the links.
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