The easist way I've seen this done has been with the Bob Swift CLI tools. Another user posted a good work around in the community post Bulk delete JIRA projects, groups, users.
There is a feature request for this issue that you can find at JRASERVER-31028. Please vote on this issue to add impact. This will automatically notify you when the ticket is updated. Additionally please include your use case so our devs have a better understanding as to why this feature is important.
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