I set up the same filter because I they really are working on the same projects, however I didn't expect the velocity or other reports to share info from both teams. Is this the best way to set up a new board or should I be doing something differently?
You could try using Parallel Sprints as well.
Hope this helps.
You could use a different filter on each board, which only includes issues assigned to team members + all unassigned issues (for sprint planning). That way, the reports should give details as expected.
See https://answers.atlassian.com/questions/310780/how-to-manage-more-scrum-teams-for-one-backlog
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