I'm not quite sure what you're trying to achieve, but regarding new boards from GreenHopper, sprints are managed by a custom field called SPRINT (a GH field) and no longer by a version from a JIRA project.
Also, the new boards use a JIRA filter to retrieve the issues so you can make changes on the filters used by the board to suit your needs (mapping for components, for example) .
So, could you please try to explain a little bit what you're trying to do?
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