can you edit what apps display in the menu (i.e. Confluence, JIRA, App A) and make it visible for some users and not others?
I'm assuming he means the "hamburger" menu. Those three lines at the top left of the apps in the header bar (there's one here on answers - it'll jump out to all of Atlassian's Jira/Confluence/Bitbucket stuff they think we should have quick links to)
You can edit that somewhere from the admin sections, but you also get "configure" as an option at the bottom of it when you're logged in as an admin.
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