Hi there, Dinali.
Can you clarify specifically which Atlassian product you would like to have connected to WSO2 Identity Server? I came across the following articles for JIRA and Confluence but I was not sure which one applies to you since you only mentioned Atlassian:
Take note that the article dates back to 2015, so there might be some changes in the way it is implemented. So, it behaves more like a reference instead of a full complete guide.
I work for Kantega SSO, one of the Marketplace vendors supporting SAML SSO for the Atlassian Server and Datacenter products.
You find our step-by-step guide for setting up WSO2 SAML authentication here: https://docs.kantega.no/display/KA/WSO2
Please reach out if you need assistanse with the setup.
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