Problem processing revisions from repository

[Oleg Garipov]

Fisheye does not display recent commits in repo.

Fisheye is having trouble indexing repository ABC, 

Caused by: java.lang.RuntimeException: 
getManifestParentDbId(318) returned duplicate id '318' 
while looking for manifest for path 'application-dev.properties'
at com.atlassian.fisheye.manifest.DeltaManifest.getParentCommitId
(DeltaManifest.java:135) [fisheye.jar:?]

How can this be fixed?

 

2017-09-25 13:02:39,037 WARN  - Problem processing revisions from repository ABC (ABC) due to class com.cenqua.fisheye.rep.RepositoryClientException - com.atlassian.fisheye.dvcs.handler.DvcsProcessException: Error while communicating with VCS:

com.cenqua.fisheye.rep.RepositoryClientException: com.atlassian.fisheye.dvcs.handler.DvcsProcessException: Error while communicating with VCS:

        at com.atlassian.fisheye.dvcs.DvcsScanner.processRevisions(DvcsScanner.java:345) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner.processRevisions(GitScanner.java:385) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.LifecycleRepositoryScanner.slurpRepository(LifecycleRepositoryScanner.java:83) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner.slurpRepository(GitScanner.java:1597) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.LifecycleRepositoryScanner.doSlurpTransaction(LifecycleRepositoryScanner.java:50) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.BaseRepositoryScanner.ping(BaseRepositoryScanner.java:73) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.BaseRepositoryEngine.doSlurp(BaseRepositoryEngine.java:85) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.RepositoryEngine.slurp(RepositoryEngine.java:419) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.ping.IndexingPingRequest.doRequest(IndexingPingRequest.java:28) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.ping.IncrementalPingRequest.doRequest(IncrementalPingRequest.java:30) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.ping.PingRequest$1.run(PingRequest.java:55) [fisheye.jar:?]

        at com.cenqua.fisheye.util.NamedExecution.run(NamedExecution.java:27) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.ping.PingRequest.process(PingRequest.java:52) [fisheye.jar:?]

        at com.cenqua.fisheye.rep.RepositoryHandle.processPingRequests(RepositoryHandle.java:211) [fisheye.jar:?]

        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) [?:1.8.0_121]

        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [?:1.8.0_121]

        at java.lang.Thread.run(Thread.java:745) [?:1.8.0_121]

Caused by: com.atlassian.fisheye.dvcs.handler.DvcsProcessException: Error while communicating with VCS:

        at com.atlassian.fisheye.dvcs.client.DvcsContext.executeWithInput(DvcsContext.java:226) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner.processChanges(GitScanner.java:1431) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner.slurpCommits(GitScanner.java:1402) [fisheye.jar:?]

        at com.atlassian.fisheye.dvcs.DvcsScanner.processCommitStream(DvcsScanner.java:534) [fisheye.jar:?]

        at com.atlassian.fisheye.dvcs.DvcsScanner.processBranch(DvcsScanner.java:492) [fisheye.jar:?]

        at com.atlassian.fisheye.dvcs.DvcsScanner.processRevisions(DvcsScanner.java:282) [fisheye.jar:?]

        ... 16 more

Caused by: com.atlassian.utils.process.ProcessException: While executing: "git show -m --no-abbrev --raw --stdin --no-renames --pretty=format:C:%H%nP:%P%nA:%aN%nE:%aE%nR:%cN%nF:%cE%nD:%at%nS:%s%nB:%b%n@@fe_body_end@@" in [/appdata/fisheye01dev/data/var/cache/ABC/clone]

        at com.atlassian.fisheye.dvcs.client.DvcsContext.executeCommand(DvcsContext.java:263) [fisheye.jar:?]

       at com.atlassian.fisheye.dvcs.client.DvcsContext.executeCommand(DvcsContext.java:235) [fisheye.jar:?]

        at com.atlassian.fisheye.dvcs.client.DvcsContext.executeWithInput(DvcsContext.java:224) [fisheye.jar:?]

        ... 21 more

Caused by: com.atlassian.utils.process.ProcessException: java.lang.RuntimeException: Error processing path GitChangePath{action=MODIFY, srcPath='null', path='application-dev.properties', srcHash='bc38907cb0b016c41dfe21ac48c960381430a8be', destHash='66392ed1f4e2ac2e967899fce28a1cc38497b36b', destMode=33188}

        at com.atlassian.utils.process.PluggableProcessHandler.setException(PluggableProcessHandler.java:158) [atlassian-processutils-1.5.14.jar:?]

        at com.atlassian.utils.process.PluggableProcessHandler.complete(PluggableProcessHandler.java:50) [atlassian-processutils-1.5.14.jar:?]

        at com.atlassian.utils.process.ExternalProcessImpl.wrapUpProcess(ExternalProcessImpl.java:509) [atlassian-processutils-1.5.14.jar:?]

        at com.atlassian.utils.process.ExternalProcessImpl.finish(ExternalProcessImpl.java:423) [atlassian-processutils-1.5.14.jar:?]

        at com.atlassian.utils.process.ExternalProcessImpl.execute(ExternalProcessImpl.java:378) [atlassian-processutils-1.5.14.jar:?]

        at com.atlassian.fisheye.dvcs.client.DvcsContext.executeCommand(DvcsContext.java:250) [fisheye.jar:?]

        ... 23 more

Caused by: java.lang.RuntimeException: Error processing path GitChangePath{action=MODIFY, srcPath='null', path='application-dev.properties', srcHash='bc38907cb0b016c41dfe21ac48c960381430a8be', destHash='66392ed1f4e2ac2e967899fce28a1cc38497b36b', destMode=33188}

        at com.atlassian.fisheye.git.GitScanner.processChangePath(GitScanner.java:1020) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner.processFileRevisions(GitScanner.java:949) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner.processGitCommit(GitScanner.java:875) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner$13.processCommit(GitScanner.java:1538) [fisheye.jar:?]

        at com.atlassian.fisheye.git.client.GitChangeParser.handleCommit(GitChangeParser.java:235) [fisheye.jar:?]

        at com.atlassian.fisheye.git.client.GitChangeParser.complete(GitChangeParser.java:228) [fisheye.jar:?]

        at com.atlassian.utils.process.PluggableProcessHandler.complete(PluggableProcessHandler.java:48) [atlassian-processutils-1.5.14.jar:?]

        ... 27 more

Caused by: java.lang.RuntimeException: getManifestParentDbId(318) returned duplicate id '318' while looking for manifest for path 'application-dev.properties'

        at com.atlassian.fisheye.manifest.DeltaManifest.getParentCommitId(DeltaManifest.java:135) [fisheye.jar:?]

        at com.atlassian.fisheye.manifest.DeltaManifest.getManifestPath(DeltaManifest.java:122) [fisheye.jar:?]

        at com.atlassian.fisheye.manifest.DeltaManifest.getPathCommit(DeltaManifest.java:109) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitCache.getFileRevisionAtManifest(GitCache.java:244) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner$DiffInfoContext.resolveParents(GitScanner.java:1121) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner$DiffInfoContext.<init>(GitScanner.java:1049) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner$DiffInfoContext.<init>(GitScanner.java:1040) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner.getDiffInfoContext(GitScanner.java:1184) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner.processModification(GitScanner.java:1264) [fisheye.jar:?]

        at com.atlassian.fisheye.git.GitScanner.processChangePath(GitScanner.java:1004) [fisheye.jar:?]

        ... 33 more