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Upgrading Confluence from 3.3.3 to 3.5.13

Jose Medina
Jose Medina December 29, 2016

Is it possible to upgrade to 3.5.13 from 3.3.3 ?  I'm using the war distribution  and I changed my symlink to point to the newever version and when I start tomcat I get the following errors:

 

2016-12-29 10:22:26,269 INFO [main] [com.atlassian.confluence.lifecycle] contextInitialized Starting Confluence 3.5.13 (build #2171)
2016-12-29 10:22:28,451 INFO [main] [atlassian.plugin.manager.DefaultPluginManager] init Initialising the plugin system
2016-12-29 10:22:28,622 INFO [main] [atlassian.plugin.manager.DefaultPluginManager] init Plugin system started in 0:00:00.169
2016-12-29 10:22:29,732 INFO [main] [com.atlassian.confluence.lifecycle] <init> Bootstrapping Coherence cluster manager.
2016-12-29 10:22:30,364 INFO [main] [springframework.web.context.ContextLoader] initWebApplicationContext Root WebApplicationContext: initialization started
2016-12-29 10:22:32,077 INFO [main] [com.atlassian.confluence.lifecycle] <init> Loading Coherence cache manager
2016-12-29 10:22:33,780 WARN [Logger@1105734171 3.3.1/389] [Coherence] log 2016-12-29 10:22:33.779 Oracle Coherence GE 3.3.1/389 <Warning> (thread=main, member=n/a): UnicastUdpSocket failed to set receive buffer size to 1428 packets (2096304 bytes); actual size is 85 packets (124928 bytes). Consult your OS documentation regarding increasing the maximum socket buffer size. Proceeding with the actual value may cause sub-optimal performance.
2016-12-29 10:22:46,108 INFO [main] [springframework.web.context.ContextLoader] initWebApplicationContext Root WebApplicationContext: initialization completed in 15743 ms
2016-12-29 10:22:47,124 INFO [main] [confluence.user.migration.AtlassianUserMigrator] validate validated repository [ wdc1 ] with [ com.atlassian.confluence.user.migration.LdapRepositoryConfigurationMigrator@352cdad3 ]
2016-12-29 10:22:47,126 ERROR [main] [confluence.user.migration.LdapRepositoryConfigurationMigrator] validateObjectClassDefined Property groupSearchFilter does not define an objectClass filter
2016-12-29 10:22:47,127 ERROR [main] [confluence.user.migration.LdapRepositoryConfigurationMigrator] validateObjectClassDefined Property userSearchFilter does not define an objectClass filter
2016-12-29 10:22:47,127 INFO [main] [confluence.user.migration.AtlassianUserMigrator] validate validated repository [ wdc2 ] with [ com.atlassian.confluence.user.migration.LdapRepositoryConfigurationMigrator@352cdad3 ]
2016-12-29 10:22:47,128 INFO [main] [confluence.user.migration.AtlassianUserMigrator] validate validated repository [ hibernateRepository ] with [ com.atlassian.confluence.user.migration.HibernateRepositoryConfigurationMigrator@6849b026 ]
2016-12-29 10:22:47,144 ERROR [main] [atlassian.confluence.upgrade.UpgradeLauncherServletContextListener] contextInitialized Upgrade failed, application will not start: Upgrade task com.atlassian.confluence.upgrade.upgradetask.AtlassianUserToEmbeddedCrowdConfigurationUpgradeTask@7897ce5d failed during the VALIDATION phase
com.atlassian.confluence.upgrade.UpgradeException: Upgrade task com.atlassian.confluence.upgrade.upgradetask.AtlassianUserToEmbeddedCrowdConfigurationUpgradeTask@7897ce5d failed during the VALIDATION phase
        at com.atlassian.confluence.upgrade.AbstractUpgradeManager.executeUpgradeStep(AbstractUpgradeManager.java:205)
        at com.atlassian.confluence.upgrade.AbstractUpgradeManager.validateUpgradeTasks(AbstractUpgradeManager.java:140)
        at com.atlassian.confluence.upgrade.AbstractUpgradeManager.upgrade(AbstractUpgradeManager.java:70)
        at com.atlassian.confluence.upgrade.impl.DefaultUpgradeManager.upgrade(DefaultUpgradeManager.java:140)
        at com.atlassian.confluence.upgrade.UpgradeLauncherServletContextListener.contextInitialized(UpgradeLauncherServletContextListener.java:28)
        at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4244)
        at org.apache.catalina.core.StandardContext.start(StandardContext.java:4743)
        at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791)
        at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771)
        at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:526)
        at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637)
        at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563)
        at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498)
        at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277)
        at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321)
        at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:142)
        at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053)
        at org.apache.catalina.core.StandardHost.start(StandardHost.java:722)
        at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045)
        at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:443)
        at org.apache.catalina.core.StandardService.start(StandardService.java:516)
        at org.apache.catalina.core.StandardServer.start(StandardServer.java:710)
        at org.apache.catalina.startup.Catalina.start(Catalina.java:593)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:95)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:56)
        at java.lang.reflect.Method.invoke(Method.java:620)
        at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
        at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
2016-12-29 10:22:47,148 ERROR [main] [atlassian.confluence.upgrade.UpgradeLauncherServletContextListener] contextInitialized 2 errors were encountered during upgrade:
2016-12-29 10:22:47,149 ERROR [main] [atlassian.confluence.upgrade.UpgradeLauncherServletContextListener] contextInitialized 1: Property groupSearchFilter does not define an objectClass filter
2016-12-29 10:22:47,149 ERROR [main] [atlassian.confluence.upgrade.UpgradeLauncherServletContextListener] contextInitialized 2: Property userSearchFilter does not define an objectClass filter
2016-12-29 10:22:47,864 INFO [main] [com.atlassian.confluence.lifecycle] init Confluence is ready to serve

 

 

<ldap key="domain" name="domain" cache="true">
                <host>ipaddress</host>
                <port>389</port>
                <securityPrincipal>cn=user,cn=users,dc=domain,dc=com</securityPrincipal>
                <securityCredential>password</securityCredential>
                <securityProtocol>plain</securityProtocol>
                <securityAuthentication>simple</securityAuthentication>
                <baseContext>dc=domain,dc=com</baseContext>
                <baseUserNamespace>ou=Domain-Accounts,dc=domain,dc=com</baseUserNamespace>
                <baseGroupNamespace>ou=DOMAINOU-Groups,dc=litle,dc=com</baseGroupNamespace>
                <usernameAttribute>sAMAccountName</usernameAttribute>
                <userSearchFilter>(objectClass=person)</userSearchFilter>
                <firstnameAttribute>givenName</firstnameAttribute>
                <surnameAttribute>sn</surnameAttribute>
                <emailAttribute>mail</emailAttribute>
                <groupnameAttribute>cn</groupnameAttribute>
                <groupSearchFilter>(info=Confluence)</groupSearchFilter>
                <membershipAttribute>member</membershipAttribute>
                <userSearchAllDepths>true</userSearchAllDepths>
                <groupSearchAllDepths>false</groupSearchAllDepths>
        </ldap>
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Nic Brough -Adaptavist-
Nic Brough -Adaptavist-
Community Leader
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December 29, 2016

That's not how you do an upgrade, from my memory.  what documentation are you following?

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Jose Medina
Jose Medina December 29, 2016

I fixed the issue by changing the <groupSearchFilter>(info=Confluence)</groupSearchFilter>  to <groupSearchFilter>(objectClass=person)</groupSearchFilter>


however i'm having a lot of errors with the index, is there a way I can manually do it from the command line?

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Jose Medina
Jose Medina December 29, 2016

I restarted tomcat and it seems confluence was able to start successful, however when I go to the dashboard or any other page it says "You are not permitted to perform this operation."

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Nic Brough -Adaptavist-
Nic Brough -Adaptavist-
Community Leader
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December 29, 2016

No, I'm not sure what you have done for the upgrade, but there's no mention of symbolic links in the upgrade doc - is there a reason you are doing it differently?

 

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Jose Medina
Jose Medina December 29, 2016

yes because the context file in tomcat points to /usr/local/confluence/current and  current is a symbolic link to  confluence-3.3-std,   and then I changed the symbolic link  to 3.5.13 

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Nic Brough -Adaptavist-
Nic Brough -Adaptavist-
Community Leader
Community Leader
Community Leaders are connectors, ambassadors, and mentors. On the online community, they serve as thought leaders, product experts, and moderators.
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December 29, 2016

What about the rest of the instructions?

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Jose Medina
Jose Medina December 29, 2016

I performed all the rest and I received a bunch of errors when confluence was doing the index, 

 

After I login to confluence I'm not able to see any page it says "You are not permitted to perform this operation."

I made a change on the atlassian-user.xml

on 3.3 it was

<groupSearchFilter>(info=Confluence)</groupSearchFilter>  

on 3.5.13 

 <groupSearchFilter>(objectClass=person)</groupSearchFilter>


I believe I need to add more settings to the groupSearchFilter for it to allow me to view pages on confluence.

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Jose Medina
Jose Medina January 3, 2017

I'ms till struggling trying to get confluence to recognize the group in AD, I changed the value to this and restarted confluence and still not able to see any of the content.

 

 <groupSearchFilter>(&(objectCategory=Group)(|(cn=Confluence Users)(cn=confluence-administrators)))</groupSearchFilter>

 

The reason why I changed it was because the upgrade to 3.5.13 did not like the previous value which was:

 

<groupSearchFilter>(info=Confluence)</groupSearchFilter>  

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