Bitbucket plugin : Classes found in the wrong directory

Hi

I'm trying to added restructuredText support to my plugin and I added 

https://gitlab.nuiton.org/nuiton/jrst

to my dependencies. But now I can't build plugin.Error is

'Classes found in the wrong directory: {Lib/... ' 

It happens if I run atlas-package.

Lib folder contains classes which come from jython which in turn is dependence of jrst.

I guess some specific OSGI configuration is required. 

pom.xml 

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">

    <modelVersion>4.0.0</modelVersion>
    <groupId>org.example.bitbucket</groupId>
    <artifactId>plugin</artifactId>
    <version>1.0.0</version>

    <name>Plugin Example</name>
    <description>Some description</description>
    <packaging>atlassian-plugin</packaging>

    <dependencyManagement>
        <dependencies>
            <dependency>
                <groupId>com.atlassian.bitbucket.server</groupId>
                <artifactId>bitbucket-parent</artifactId>
                <version>${bitbucket.version}</version>
                <type>pom</type>
                <scope>import</scope>
            </dependency>
        </dependencies>
    </dependencyManagement>
    
    <repositories>
        <repository>
            <id>central</id>
            <name>Maven Central</name>
            <url>http://repo1.maven.org/maven2/</url>
        </repository>
        <repository>
            <id>atlassian-public</id>
            <url>https://maven.atlassian.com/repository/public</url>
            <snapshots>
                <enabled>true</enabled>
                <updatePolicy>never</updatePolicy>
                <checksumPolicy>warn</checksumPolicy>
            </snapshots>
            <releases>
                <enabled>true</enabled>
                <checksumPolicy>warn</checksumPolicy>
            </releases>
        </repository>
    </repositories>
    

    <dependencies>
        <dependency>
            <groupId>com.atlassian.sal</groupId>
            <artifactId>sal-api</artifactId>
            <scope>provided</scope>
        </dependency>
        <dependency>
            <groupId>com.atlassian.bitbucket.server</groupId>
            <artifactId>bitbucket-api</artifactId>
            <scope>provided</scope>
        </dependency>
        <dependency>
            <groupId>com.atlassian.bitbucket.server</groupId>
            <artifactId>bitbucket-spi</artifactId>
            <scope>provided</scope>
        </dependency>
        <dependency>
            <groupId>com.atlassian.bitbucket.server</groupId>
            <artifactId>bitbucket-page-objects</artifactId>
            <scope>provided</scope>
        </dependency>
        <dependency>
            <groupId>javax.servlet</groupId>
            <artifactId>javax.servlet-api</artifactId>
            <scope>provided</scope>
        </dependency>
        <dependency>
            <groupId>junit</groupId>
            <artifactId>junit</artifactId>
            <scope>test</scope>
        </dependency>
        <dependency>
            <groupId>commons-lang</groupId>
            <artifactId>commons-lang</artifactId>
            <scope>provided</scope>
        </dependency>

        <dependency>
            <groupId>com.atlassian.plugin</groupId>
            <artifactId>atlassian-spring-scanner-annotation</artifactId>
            <scope>provided</scope>
        </dependency>

        <dependency>
            <groupId>javax.inject</groupId>
            <artifactId>javax.inject</artifactId>
            <version>1</version>
            <scope>provided</scope>
        </dependency>
        
        <dependency>
            <groupId>com.atlassian.upm</groupId>
            <artifactId>upm-api</artifactId>
            <version>2.0.1</version>
            <scope>provided</scope>
        </dependency>
        
        <dependency>
            <groupId>com.atlassian.upm</groupId>
            <artifactId>licensing-api</artifactId>
            <version>2.0.1</version>
            <scope>provided</scope>
        </dependency>
        

        <!-- WIRED TEST RUNNER DEPENDENCIES -->
        <!--
        <dependency>
            <groupId>com.atlassian.plugins</groupId>
            <artifactId>atlassian-plugins-osgi-testrunner</artifactId>
            <version>${plugin.testrunner.version}</version>
            <scope>test</scope>
        </dependency>
        -->
        <dependency>
            <groupId>javax.ws.rs</groupId>
            <artifactId>jsr311-api</artifactId>
            <version>1.1.1</version>
            <scope>provided</scope>
        </dependency>
        <dependency>
            <groupId>com.google.code.gson</groupId>
            <artifactId>gson</artifactId>
        </dependency>
        <dependency>
            <groupId>com.atlassian.bitbucket.server</groupId>
            <artifactId>bitbucket-git-api</artifactId>
            <scope>provided</scope>
        </dependency>
        <dependency>
            <groupId>com.atlassian.bitbucket.server</groupId>
            <artifactId>bitbucket-scm-common</artifactId>
            <scope>provided</scope>
        </dependency>        

        <dependency>
            <groupId>com.atlassian.soy</groupId>
            <artifactId>soy-template-renderer-api</artifactId>
            <scope>provided</scope>
        </dependency>
        
        <dependency>
            <groupId>com.atlassian.plugins</groupId>
            <artifactId>atlassian-plugins-webresource</artifactId>
            <scope>provided</scope>
        </dependency>
        
        <dependency>
            <groupId>com.atlassian.activeobjects</groupId>
            <artifactId>activeobjects-plugin</artifactId>
            <scope>provided</scope>
        </dependency>
        <dependency>
            <groupId>com.atlassian.plugins</groupId>
            <artifactId>atlassian-plugins-webfragment-api</artifactId>
            <scope>provided</scope>
        </dependency>
        <dependency>
            <groupId>org.nuiton.jrst</groupId>
            <artifactId>jrst</artifactId>
            <version>2.2</version>
        </dependency>
        
    </dependencies>

    <build>
        <plugins>
            <plugin>
                <groupId>com.atlassian.maven.plugins</groupId>
                <artifactId>bitbucket-maven-plugin</artifactId>
                <version>${amps.version}</version>
                <extensions>true</extensions>
                <configuration>
                    <enableQuickReload>true</enableQuickReload>
                    <pluginArtifact>
                        <groupId>com.atlassian.labs.plugins</groupId>
                        <artifactId>quickreload</artifactId>
                        <version>2.0.0</version>
                    </pluginArtifact>            
                    <enableFastdev>false</enableFastdev>
                    <products>
                        <product>
                            <id>bitbucket</id>
                            <instanceId>bitbucket</instanceId>
                            <version>${bitbucket.version}</version>
                            <dataVersion>${bitbucket.data.version}</dataVersion>
                        </product>  
                    </products>
                    <instructions>
                        <Atlassian-Plugin-Key>${atlassian.plugin.key}</Atlassian-Plugin-Key>

                        <!-- Add package to export here -->
                        <Export-Package></Export-Package>

                        <!-- Add package import here -->
                        <Import-Package>
                            com.atlassian.bitbucket.*;resolution:="optional",
                            *
                        </Import-Package>

                        <!-- Ensure plugin is Spring powered -->
                        <Spring-Context>*</Spring-Context>
                    </instructions>
                </configuration>
            </plugin>

            <plugin>
                <groupId>com.atlassian.plugin</groupId>
                <artifactId>atlassian-spring-scanner-maven-plugin</artifactId>
                <version>${atlassian.spring.scanner.version}</version>
                <executions>
                    <execution>
                        <goals>
                            <goal>atlassian-spring-scanner</goal>
                        </goals>
                        <phase>process-classes</phase>
                    </execution>
                </executions>
                <configuration>
                    <verbose>true</verbose>
                </configuration>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-surefire-plugin</artifactId>
                <version>2.15</version>
            </plugin>
        </plugins>
    </build>
    
    <properties>
        <bitbucket.version>5.0.1</bitbucket.version>
        <bitbucket.data.version>5.0.1</bitbucket.data.version>
        <amps.version>6.3.2</amps.version>
        <plugin.testrunner.version>1.2.3</plugin.testrunner.version>
        <atlassian.spring.scanner.version>2.1.3</atlassian.spring.scanner.version>
        <!-- This key is used to keep the consistency between the key in atlassian-plugin.xml and the key to generate bundle. -->
        <atlassian.plugin.key>${project.groupId}.${project.artifactId}</atlassian.plugin.key>
        <maven.compiler.source>1.8</maven.compiler.source>
        <maven.compiler.target>1.8</maven.compiler.target>
    </properties>
    
</project>

plugin code is here https://github.com/AndreyLevchenko/bitbucket-plugin-example

it's enough to run atlas-package to reproduce issue 

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